BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C08SP1|AL426496
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1272 1399 0.0
>3x_Contig1272
Length = 8315
Score = 1399 bits (703), Expect = 0.0
Identities = 776/803 (96%)
Strand = Plus / Minus
Query: 1 ctgaaaactctttctcaaatacaatatacattattgtaccccaattctggtctcagaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7147 ctgaaaactctttctcaaatacaatatacattattgtaccccaattctggtctcagaatt 7088
Query: 61 taaaaccttcgatgtcatattcactgcagagtatgagtaacactggcatattagccgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7087 taaaaccttcgatgtcatattcactgcagagtatgagtaacactggcatattagccgagg 7028
Query: 121 aaaggcattaaaactaatagcaaaagaggatacagcagtaatattttattaaacattcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7027 aaaggcattaaaactaatagcaaaagaggatacagcagtaatattttattaaacattcac 6968
Query: 181 catctttgaagtggtcctgttatatatgatatttttttgattttcgtctttaaccatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6967 catctttgaagtggtcctgttatatatgatatttttttgattttcgtctttaaccatatt 6908
Query: 241 aaaattttcacaaaacagaaattaacaagtagaaaatgacaggaaatcagtccagttagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6907 aaaattttcacaaaacagaaattaacaagtagaaaatgacaggaaatcagtccagttagc 6848
Query: 301 actgttagggctgactttgaagacggaaagaagtctaaggtaacttgtgctatgtctacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6847 actgttagggctgactttgaagacggaaagaagtctaaggtaacttgtgctatgtctacc 6788
Query: 361 aaaagcmtgcctcatcaatatgtaacgaaataatctgatagtattggactttaaatcgag 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6787 aaaagcatgcctcatcaatatgtaacgaaataatctgatagtattggactttaaatcgag 6728
Query: 421 aaaatatttgccgtagttacaaaagttatatatgamtagagtatatgacttttattgcmt 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6727 aaaatatttgccgtagttacaaaagttatatatgaatagagtatatgacttttattgctg 6668
Query: 481 ttattcagaagcggtagctctggtgtagatggcttgcttggagtgcttggvaactggctt 540
| ||||||| | ||||||||| |||||||||||||| || ||||| | |||| |||
Sbjct: 6667 ggagccagaagctggagctctggtttagatggcttgctttgattgctttgaaactttctt 6608
Query: 541 gatgatgccttcgttttccaagtgtctcamagcaactctggccaaggaaccacccaactt 600
|| |||||||| ||| |||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 6607 tattatgccttcttttcccaattttctcaaagcaactctggccaaggaaccacccaactt 6548
Query: 601 gaatctgtcaaccaacacagagacggaaacgtatctgtaggttggagcttccttcataat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6547 gaatctgtcaaccaacacagagacggaaacgtatctgtaggttggagcttccttcataat 6488
Query: 661 tctgtcgaatttatcttggtccaagacaacagcgtgcttagccttgtccttgtgggactt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6487 tctgtcgaatttatcttggtccaagacaacagcgtgcttagccttgtccttgtgggaact 6428
Query: 721 cttagaccacttcttcttggacttcttaccaccagccatggcagcggcggccttagcggc 780
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6427 cttagaccacttcttcttggacctcttaccaccagccatggcagcggcggccttagcggc 6368
Query: 781 tttggacaattgttgttttggag 803
|||||||||||||||||||||||
Sbjct: 6367 tttggacaattgttgttttggag 6345
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5922
Number of Sequences: 1807
Number of extensions: 5922
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 803
length of database: 10,358,551
effective HSP length: 16
effective length of query: 787
effective length of database: 10,329,639
effective search space: 8129425893
effective search space used: 8129425893
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)